Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar protein flis | PQ455_14910 | P26609 | + | 3102238 - 3102639 | 14120.9 |
| giy-yig nuclease family protein | PQ455_14915 | Q18E71 | - | 3102829 - 3103179 | 13194.8 |
| class i sam-dependent methyltransferase | PQ455_14920 | Not Available | - | 3103238 - 3103828 | 20471.4 |
| rida family protein | PQ455_14925 | Q8U308 | - | 3103867 - 3104355 | 16916.6 |
| tonb-dependent receptor | PQ455_14930 | P17315 | - | 3104518 - 3107193 | 94422.8 |
| rna 2',3'-cyclic phosphodiesterase | PQ455_14935 | O28125 | - | 3107456 - 3107995 | 19322.4 |
| bax inhibitor-1/ycca family protein | PQ455_14940 | Q9ZE15 | + | 3108159 - 3108890 | 25933.0 |
| hypothetical protein | PQ455_14945 | Not Available | - | 3108961 - 3109341 | 13389.8 |
| ycei family protein | PQ455_14950 | B7V411 | - | 3109447 - 3110049 | 20581.1 |
| ketol-acid reductoisomerase | PQ455_14955 | A5V3W3 | - | 3110258 - 3111277 | 36266.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.