Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal body-associated flil family protein | PQ455_14860 | O67712 | + | 3093939 - 3094532 | 20881.9 |
| flim/flin family flagellar motor switch protein | PQ455_14865 | Q51465 | + | 3094535 - 3095503 | 34384.5 |
| flagellar motor switch protein flin | PQ455_14870 | Q51466 | + | 3095500 - 3095820 | 11348.7 |
| flagellar biosynthetic protein flio | PQ455_14875 | Q45979 | + | 3095817 - 3096101 | 10112.8 |
| flagellar type iii secretion system pore protein flip | PQ455_14880 | O85133 | + | 3096217 - 3096987 | 27638.0 |
| flagellar biosynthetic protein fliq | PQ455_14885 | Q8KA36 | + | 3097137 - 3097418 | 9815.4 |
| flagellar biosynthetic protein flir | PQ455_14890 | P54702 | + | 3097415 - 3098197 | 26534.6 |
| hypothetical protein | PQ455_14895 | Not Available | + | 3098260 - 3099216 | 34746.5 |
| flagellar type iii secretion system protein flhb | PQ455_14900 | Q56886 | + | 3099264 - 3100400 | 40623.5 |
| flagellar filament capping protein flid | PQ455_14905 | P24216 | + | 3100615 - 3102225 | 54052.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.