Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | PQ455_14810 | Q96266 | - | 3082441 - 3083091 | 23534.3 |
| flagellin | PQ455_14815 | P53606 | - | 3083456 - 3085393 | 63501.9 |
| sigma 54-interacting transcriptional regulator | PQ455_14820 | Q9I4N3 | + | 3085687 - 3086967 | 44813.4 |
| flagellar hook-basal body complex protein flie | PQ455_14825 | C5BSE0 | + | 3086979 - 3087317 | 11777.0 |
| flagellar basal-body ms-ring/collar protein flif | PQ455_14830 | Q53151 | + | 3087321 - 3089072 | 60170.9 |
| flagellar motor switch protein flig | PQ455_14835 | P0ABZ3 | + | 3089083 - 3090087 | 35859.3 |
| hypothetical protein | PQ455_14840 | Not Available | + | 3090080 - 3090751 | 23809.0 |
| flii/yscn family atpase | PQ455_14845 | Q9I4N1 | + | 3090781 - 3092079 | 45948.6 |
| hypothetical protein | PQ455_14850 | Not Available | + | 3092076 - 3092492 | 14719.6 |
| flagellar hook-length control protein flik | PQ455_14855 | Not Available | + | 3092489 - 3093919 | 48325.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.