Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspm | PQ455_14710 | Not Available | - | 3062649 - 3063155 | 17375.0 |
| type ii secretion system protein gspl | PQ455_14715 | P31707 | - | 3063152 - 3064207 | 35554.4 |
| type ii secretion system major pseudopilin gspg | PQ455_14720 | Q00514 | + | 3064313 - 3064756 | 15691.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | PQ455_14725 | Q00515 | + | 3064753 - 3065190 | 15013.0 |
| type ii secretion system minor pseudopilin gspi | PQ455_14730 | Q00516 | + | 3065187 - 3065582 | 13605.2 |
| type ii secretion system protein n | PQ455_14735 | Not Available | + | 3065579 - 3066397 | 26882.7 |
| type ii secretion system secretin gspd | PQ455_14740 | P35818 | + | 3066451 - 3068475 | 69764.1 |
| hypothetical protein | PQ455_14745 | Not Available | - | 3068586 - 3069020 | 14633.8 |
| hypothetical protein | PQ455_14750 | Not Available | - | 3069017 - 3069493 | 16584.4 |
| hypothetical protein | PQ455_14755 | Not Available | - | 3069490 - 3070002 | 17859.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.