Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | PQ455_14660 | Q1CBU1 | - | 3050538 - 3053540 | 105417.0 |
| mfs transporter | PQ455_14665 | P0AA77 | - | 3053612 - 3054886 | 45749.8 |
| shikimate dehydrogenase | PQ455_14670 | Q82M83 | - | 3054883 - 3055761 | 30597.7 |
| tetr/acrr family transcriptional regulator | PQ455_14675 | Q88FX7 | + | 3055890 - 3056546 | 24801.6 |
| type ii secretion system protein gspk | PQ455_14680 | Q00518 | - | 3056605 - 3057456 | 30000.4 |
| type ii secretion system protein gspj | PQ455_14685 | Q00517 | - | 3057453 - 3057995 | 19095.3 |
| hypothetical protein | PQ455_14690 | Not Available | - | 3057992 - 3058945 | 31545.0 |
| hypothetical protein | PQ455_14695 | Not Available | + | 3059131 - 3059730 | 20049.1 |
| type ii secretion system f family protein | PQ455_14700 | Q00513 | - | 3059933 - 3061150 | 43209.2 |
| type ii secretion system atpase gspe | PQ455_14705 | Q00512 | - | 3061147 - 3062652 | 54273.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.