Sphingomonas naphthae DKC-5-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas naphthae
StrainDKC-5-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas naphthae DKC-5-1

Accession NumberCP117411.1

Gene Summary

Adenine Count

633777 bp

Thymine Count

632940 bp

Guanine Count

1323979 bp

Cytosine Count

1329131 bp

Genome Length

3919827 bp

Protein-coding Genes

3655 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
iclr family transcriptional regulatorPQ455_14610P77300+3041771 - 304258930019.7
protocatechuate 3,4-dioxygenase subunit betaPQ455_14615P15110+3042695 - 304341126413.3
protocatechuate 3,4-dioxygenase subunit alphaPQ455_14620P15109+3043401 - 304410825285.7
lyase family proteinPQ455_14625O31385+3044111 - 304526237992.1
3-oxoadipate enol-lactonasePQ455_14630P00632+3045262 - 304644642181.8
hypothetical proteinPQ455_14635Not Available+3046448 - 30466396986.4
lysr family transcriptional regulatorPQ455_14640P0A4T4-3046797 - 304768731904.8
tim barrel proteinPQ455_14645Q88JU3+3047773 - 304962667165.5
hypothetical proteinPQ455_14650Not Available-3049772 - 30499516602.87
type ii 3-dehydroquinate dehydratasePQ455_14655Q88K84-3050005 - 305044515717.0

Displaying genes 2921 – 2930 of 3756 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites