Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | PQ455_14560 | Q54IM8 | + | 3032298 - 3033443 | 40623.5 |
| enoyl-coa hydratase/isomerase family protein | PQ455_14565 | A2VDC2 | + | 3033479 - 3034528 | 37640.0 |
| 3-hydroxyisobutyrate dehydrogenase | PQ455_14570 | Q9I5I6 | + | 3034562 - 3035446 | 28934.8 |
| hypothetical protein | PQ455_14575 | Not Available | - | 3035443 - 3035922 | 16606.9 |
| glycosidase | PQ455_14580 | Q92DF6 | + | 3036045 - 3037160 | 40771.7 |
| alpha-amylase family glycosyl hydrolase | PQ455_14585 | Q9Z3R8 | + | 3037270 - 3038865 | 58822.6 |
| glycosyltransferase family 4 protein | PQ455_14590 | C7MSY6 | + | 3038862 - 3039869 | 36583.7 |
| pirin family protein | PQ455_14595 | P58113 | - | 3039876 - 3040574 | 25008.3 |
| hypothetical protein | PQ455_14600 | Not Available | - | 3040603 - 3040908 | 10736.0 |
| superoxide dismutase family protein | PQ455_14605 | P20379 | + | 3041144 - 3041677 | 17664.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.