Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sterol desaturase family protein | PQ455_14510 | Q03529 | - | 3021962 - 3022669 | 26090.7 |
| oligosaccharide flippase family protein | PQ455_14515 | Not Available | - | 3022826 - 3024364 | 53253.2 |
| lps export abc transporter permease lptg | PQ455_14520 | P0ADC7 | - | 3024361 - 3025455 | 38939.8 |
| lps export abc transporter permease lptf | PQ455_14525 | P45333 | - | 3025452 - 3026663 | 44689.8 |
| duf2141 domain-containing protein | PQ455_14530 | Not Available | + | 3026787 - 3027317 | 18555.6 |
| diacylglycerol kinase family protein | PQ455_14535 | Not Available | + | 3027324 - 3028301 | 34551.6 |
| hypothetical protein | PQ455_14540 | Not Available | + | 3028298 - 3029221 | 32969.7 |
| hypothetical protein | PQ455_14545 | Not Available | - | 3029225 - 3029740 | 16924.1 |
| lysr family transcriptional regulator | PQ455_14550 | P52685 | - | 3029761 - 3030639 | 31987.5 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | PQ455_14555 | Q9I702 | + | 3030747 - 3032252 | 53780.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.