Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_14410 | Not Available | + | 3002104 - 3002313 | 7877.55 |
| hypothetical protein | PQ455_14415 | Not Available | + | 3002527 - 3002805 | 9864.89 |
| fad/nad(p)-binding protein | PQ455_14420 | Not Available | - | 3002898 - 3004259 | 48953.7 |
| efflux transporter outer membrane subunit | PQ455_14425 | Q9WWZ8 | - | 3004313 - 3005767 | 49556.4 |
| cusa/czca family heavy metal efflux rnd transporter | PQ455_14430 | P94177 | - | 3005764 - 3008952 | 113684.0 |
| efflux rnd transporter periplasmic adaptor subunit | PQ455_14435 | Q9ZHD0 | - | 3008949 - 3010211 | 43180.6 |
| atp-binding protein | PQ455_14440 | P45336 | - | 3010278 - 3011654 | 49500.3 |
| response regulator transcription factor | PQ455_14445 | Q9HV32 | - | 3011651 - 3012316 | 24426.6 |
| hypothetical protein | PQ455_14450 | Not Available | - | 3012355 - 3012501 | 5445.63 |
| oligopeptide transporter, opt family | PQ455_14455 | P44016 | - | 3012883 - 3014820 | 64795.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.