Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase family protein | PQ455_14260 | Q52828 | - | 2970190 - 2970801 | 22223.7 |
| dienelactone hydrolase family protein | PQ455_14265 | Q7DFU6 | - | 2970798 - 2971676 | 30002.8 |
| s9 family peptidase | PQ455_14270 | P39839 | - | 2971733 - 2973775 | 71624.3 |
| hypothetical protein | PQ455_14275 | Not Available | - | 2973995 - 2974249 | 8945.68 |
| hypothetical protein | PQ455_14280 | Not Available | - | 2974246 - 2974449 | 7581.02 |
| translation initiation factor if-1 | PQ455_14285 | Q2G552 | - | 2974496 - 2974753 | 9879.04 |
| hypothetical protein | PQ455_14290 | Not Available | - | 2974927 - 2975493 | 19677.0 |
| atp-dependent clp protease atp-binding subunit clpa | PQ455_14295 | P05444 | - | 2975573 - 2977888 | 84422.6 |
| duf1192 domain-containing protein | PQ455_14300 | Not Available | - | 2978033 - 2978233 | 7361.8 |
| nad(p)h-quinone oxidoreductase | PQ455_14305 | Q53FA7 | + | 2978306 - 2979307 | 34470.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.