Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit uvrb | PQ455_14210 | Q56998 | - | 2960341 - 2962551 | 82952.5 |
| giy-yig nuclease family protein | PQ455_14215 | Q4L3E5 | - | 2962640 - 2962930 | 10840.1 |
| cold-shock protein | PQ455_14220 | P55390 | + | 2963169 - 2963375 | 7499.79 |
| hypothetical protein | PQ455_14225 | Not Available | + | 2963585 - 2963788 | 7332.69 |
| hypothetical protein | PQ455_14230 | Not Available | - | 2963990 - 2964187 | 7317.72 |
| phosphocholine cytidylyltransferase family protein | PQ455_14235 | Q0P8J8 | - | 2964304 - 2965044 | 26749.0 |
| ntp transferase domain-containing protein | PQ455_14240 | Not Available | + | 2965105 - 2965908 | 27791.7 |
| hypothetical protein | PQ455_14245 | Not Available | + | 2965994 - 2967235 | 45578.6 |
| alpha/beta hydrolase | PQ455_14250 | Not Available | - | 2967240 - 2968433 | 43708.1 |
| 2-isopropylmalate synthase | PQ455_14255 | B8IHS8 | - | 2968435 - 2969976 | 55139.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.