Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | PQ455_14160 | Q0C089 | - | 2949189 - 2949422 | 8459.03 |
| nad-dependent epimerase/dehydratase family protein | PQ455_14165 | A0A0H3C8X7 | - | 2949522 - 2950445 | 32885.6 |
| glutamate 5-kinase | PQ455_14170 | Q1GQZ4 | - | 2950445 - 2951572 | 38674.6 |
| gnat family n-acetyltransferase | PQ455_14175 | Not Available | + | 2951740 - 2952786 | 38768.4 |
| gnat family n-acetyltransferase | PQ455_14180 | Not Available | + | 2952917 - 2953969 | 38815.8 |
| diguanylate cyclase | PQ455_14185 | P55552 | - | 2954448 - 2956616 | 77535.9 |
| metallophosphoesterase | PQ455_14190 | P0AEW5 | + | 2956733 - 2957458 | 26182.4 |
| hypothetical protein | PQ455_14195 | Not Available | - | 2957509 - 2957703 | 6725.08 |
| s9 family peptidase | PQ455_14200 | A7UKV4 | + | 2957983 - 2960040 | 74269.4 |
| hypothetical protein | PQ455_14205 | Not Available | + | 2960177 - 2960308 | 4451.23 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.