Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamine-hydrolyzing gmp synthase | PQ455_14060 | Q5NN19 | - | 2930065 - 2931621 | 56409.7 |
| methyl-accepting chemotaxis protein | PQ455_14065 | Q9I0I6 | + | 2931807 - 2932850 | 37067.1 |
| chap domain-containing protein | PQ455_14070 | Not Available | - | 2932901 - 2933512 | 21106.3 |
| hypothetical protein | PQ455_14075 | Not Available | - | 2933712 - 2934083 | 13008.7 |
| ei24 domain-containing protein | PQ455_14080 | Not Available | - | 2934080 - 2934772 | 24127.3 |
| adenosine kinase | PQ455_14085 | Q55480 | + | 2934888 - 2935883 | 34222.0 |
| sdr family oxidoreductase | PQ455_14090 | P0AG85 | + | 2936011 - 2937027 | 34797.7 |
| tpm domain-containing protein | PQ455_14095 | P55140 | - | 2937095 - 2937649 | 19850.2 |
| amino acid permease | PQ455_14100 | O07576 | - | 2937723 - 2939255 | 53277.6 |
| phosphoribosyl-atp diphosphatase | PQ455_14105 | A5V9F7 | - | 2939492 - 2939812 | 11201.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.