Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aaa family atpase | PQ455_14010 | E8PLM2 | - | 2918196 - 2919980 | 65541.9 |
| nucleotidyl transferase abieii/abigii toxin family protein | PQ455_14015 | Not Available | - | 2919998 - 2921014 | 37112.9 |
| duf6088 family protein | PQ455_14020 | Not Available | - | 2921007 - 2921600 | 21015.6 |
| hypothetical protein | PQ455_14025 | Not Available | + | 2921727 - 2922281 | 21463.6 |
| hypothetical protein | PQ455_14030 | Not Available | + | 2922290 - 2923318 | 37652.9 |
| hypothetical protein | PQ455_14035 | Not Available | + | 2923349 - 2924398 | 38624.7 |
| duf932 domain-containing protein | PQ455_14040 | Not Available | + | 2924452 - 2925645 | 44367.3 |
| parb/repb/spo0j family partition protein | PQ455_14045 | Q9ZGR8 | + | 2925820 - 2927958 | 78545.5 |
| alpa family phage regulatory protein | PQ455_14050 | P12552 | + | 2928264 - 2928548 | 11051.4 |
| tyrosine-type recombinase/integrase | PQ455_14055 | P76542 | - | 2928514 - 2929770 | 47923.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.