Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abrb/maze/spovt family dna-binding domain-containing protein | PQ455_13960 | Q8FDB5 | + | 2906091 - 2906372 | 10608.9 |
| type ii toxin-antitoxin system vapc family toxin | PQ455_13965 | Not Available | + | 2906374 - 2906784 | 14761.5 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | PQ455_13970 | A5V3U9 | + | 2906777 - 2908270 | 53903.9 |
| methylated-dna--[protein]-cysteine s-methyltransferase | PQ455_13975 | P0A697 | + | 2908291 - 2908782 | 17503.1 |
| duf418 domain-containing protein | PQ455_13980 | P42107 | - | 2908899 - 2910233 | 49372.9 |
| hamp domain-containing sensor histidine kinase | PQ455_13985 | A1TEL6 | - | 2910323 - 2911618 | 46139.3 |
| response regulator transcription factor | PQ455_13990 | A0QBQ9 | - | 2911663 - 2912340 | 24388.6 |
| tonb-dependent receptor | PQ455_13995 | P06971 | + | 2912641 - 2915076 | 87095.9 |
| restriction endonuclease | PQ455_14000 | Not Available | - | 2915475 - 2916389 | 33415.1 |
| atp-dependent helicase | PQ455_14005 | O34580 | - | 2916392 - 2918209 | 66288.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.