Sphingomonas naphthae DKC-5-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas naphthae
StrainDKC-5-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas naphthae DKC-5-1

Accession NumberCP117411.1

Gene Summary

Adenine Count

633777 bp

Thymine Count

632940 bp

Guanine Count

1323979 bp

Cytosine Count

1329131 bp

Genome Length

3919827 bp

Protein-coding Genes

3655 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
cytochrome c family proteinPQ455_13910P00076-2894741 - 289512413594.2
nad(+) synthasePQ455_13915Q9CBZ6+2895293 - 289734773621.4
cell division protein ftszPQ455_13920V6F5E5+2897531 - 289900351167.1
dsba family proteinPQ455_13925A8LVS8-2899047 - 289977225168.4
m48 family metalloproteasePQ455_13930Q9KQ40-2899769 - 290113948829.4
flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthasePQ455_13935Q5NR50-2901253 - 290237739607.7
holliday junction resolvase ruvxPQ455_13940A5V3V3-2902386 - 290287116896.6
duf3089 domain-containing proteinPQ455_13945Not Available-2902868 - 290400140423.6
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatcPQ455_13950A5V3V1+2904289 - 290457610164.2
asp-trna(asn)/glu-trna(gln) amidotransferase subunit gataPQ455_13955A5V3V0+2904576 - 290605751199.6

Displaying genes 2781 – 2790 of 3756 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites