Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa/acyl-acp dehydrogenase | PQ455_13710 | P96608 | - | 2858224 - 2859330 | 39960.2 |
| glycosyltransferase | PQ455_13715 | Not Available | - | 2859327 - 2860376 | 37709.9 |
| glycosyltransferase | PQ455_13720 | Not Available | - | 2860373 - 2861296 | 33415.4 |
| glycosyltransferase family 4 protein | PQ455_13725 | P9WMY8 | - | 2861293 - 2862399 | 40157.3 |
| hypothetical protein | PQ455_13730 | Not Available | + | 2862851 - 2863036 | 6430.94 |
| hypothetical protein | PQ455_13735 | Not Available | - | 2863065 - 2863295 | 8449.3 |
| sdr family nad(p)-dependent oxidoreductase | PQ455_13740 | Q8CN40 | - | 2863521 - 2864306 | 27496.4 |
| glutathione-dependent formaldehyde dehydrogenase | PQ455_13745 | P47734 | - | 2864320 - 2865507 | 42855.7 |
| srpbcc family protein | PQ455_13750 | P55049 | - | 2865511 - 2866086 | 20883.5 |
| catalase family protein | PQ455_13755 | P55495 | + | 2866241 - 2867335 | 39456.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.