Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3597 family protein | PQ455_13660 | Not Available | - | 2849064 - 2849477 | 13522.2 |
| duf4142 domain-containing protein | PQ455_13665 | Not Available | + | 2849614 - 2850201 | 19636.0 |
| hypothetical protein | PQ455_13670 | Not Available | + | 2850359 - 2850670 | 10647.4 |
| duf4375 domain-containing protein | PQ455_13675 | Not Available | - | 2851402 - 2851893 | 18799.2 |
| phosphatase pap2 family protein | PQ455_13680 | Not Available | - | 2852043 - 2852606 | 19911.1 |
| is256 family transposase | PQ455_13685 | P60231 | - | 2852924 - 2854126 | 44819.3 |
| atp-binding cassette domain-containing protein | PQ455_13690 | Q6N1Y7 | + | 2854263 - 2856050 | 63899.9 |
| glycosyltransferase | PQ455_13695 | P9WMX0 | - | 2856100 - 2856984 | 32967.2 |
| sam-dependent methyltransferase | PQ455_13700 | P26026 | - | 2856984 - 2857565 | 21560.1 |
| pig-l family deacetylase | PQ455_13705 | A4F9Z0 | - | 2857562 - 2858179 | 22148.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.