Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_13560 | Not Available | + | 2819787 - 2820059 | 10226.9 |
| dienelactone hydrolase family protein | PQ455_13565 | Q09571 | - | 2820079 - 2820807 | 25664.3 |
| duf3253 domain-containing protein | PQ455_13570 | Not Available | - | 2821190 - 2821450 | 9543.46 |
| dmt family transporter | PQ455_13575 | P76111 | - | 2821453 - 2821896 | 14856.4 |
| is3 family transposase | PQ455_13580 | P24577 | + | 2822102 - 2823222 | 42713.3 |
| bluf domain-containing protein | PQ455_13585 | Q76L33 | + | 2823383 - 2823787 | 14900.8 |
| hypothetical protein | PQ455_13590 | Not Available | - | 2824011 - 2824706 | 25163.8 |
| n-6 dna methylase | PQ455_13595 | P43422 | - | 2824703 - 2827774 | 114091.0 |
| hypothetical protein | PQ455_13600 | Not Available | - | 2827771 - 2828256 | 17199.0 |
| nerd domain-containing protein | PQ455_13605 | P54737 | + | 2828596 - 2832564 | 144600.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.