Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| is66 family transposase | PQ455_13510 | P55630 | + | 2804577 - 2806136 | 56936.3 |
| duf4403 family protein | PQ455_13515 | Not Available | + | 2806391 - 2807695 | 46955.7 |
| helicase-related protein | PQ455_13520 | Q1RI82 | - | 2807719 - 2810910 | 113735.0 |
| duf2252 family protein | PQ455_13525 | Not Available | + | 2811200 - 2812339 | 41815.3 |
| nad(p)/fad-dependent oxidoreductase | PQ455_13530 | Q928B5 | - | 2812336 - 2813268 | 32948.8 |
| response regulator | PQ455_13535 | Q48IV1 | - | 2813709 - 2815865 | 77471.6 |
| alpha-ketoglutarate-dependent dioxygenase alkb | PQ455_13540 | Q07G10 | - | 2816085 - 2816666 | 21964.0 |
| dna polymerase iv | PQ455_13545 | Q98NW7 | - | 2816696 - 2817829 | 41188.9 |
| exonuclease domain-containing protein | PQ455_13550 | Q8XJR3 | - | 2818254 - 2818757 | 18509.8 |
| pirin family protein | PQ455_13555 | Q9I163 | - | 2818766 - 2819644 | 30813.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.