Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | PQ455_13460 | C9RZ55 | + | 2797765 - 2798832 | 38949.9 |
| hypothetical protein | PQ455_13465 | Not Available | + | 2799242 - 2799547 | 10615.9 |
| aarf/abc1/ubib kinase family protein | PQ455_13470 | P27697 | + | 2799555 - 2800919 | 49826.0 |
| cupin domain-containing protein | PQ455_13475 | P54430 | + | 2800976 - 2801392 | 14763.8 |
| helix-hairpin-helix domain-containing protein | PQ455_13480 | P0AAR8 | - | 2801446 - 2801631 | 6703.75 |
| glutathione s-transferase | PQ455_13485 | Q9P6M1 | - | 2801641 - 2802270 | 22991.8 |
| arylesterase | PQ455_13490 | Q9HZY8 | + | 2802476 - 2803075 | 20959.8 |
| dksa/trar family c4-type zinc finger protein | PQ455_13495 | P41039 | + | 2803127 - 2803390 | 9462.97 |
| transposase | PQ455_13500 | P55640 | + | 2803737 - 2804159 | 15119.0 |
| is66 family insertion sequence element accessory protein tnpb | PQ455_13505 | P55503 | + | 2804156 - 2804509 | 12871.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.