Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3606 domain-containing protein | PQ455_13360 | Not Available | + | 2779347 - 2779523 | 6424.42 |
| sos response-associated peptidase family protein | PQ455_13365 | O34906 | + | 2779770 - 2780228 | 17439.9 |
| helix-turn-helix transcriptional regulator | PQ455_13370 | P43640 | - | 2780253 - 2780489 | 8566.26 |
| hypothetical protein | PQ455_13375 | Not Available | + | 2780772 - 2781110 | 12921.4 |
| duf2384 domain-containing protein | PQ455_13380 | Not Available | + | 2781107 - 2781463 | 13135.8 |
| hypothetical protein | PQ455_13385 | Not Available | + | 2781517 - 2782125 | 22822.1 |
| hypothetical protein | PQ455_13390 | Q6QGT3 | + | 2782303 - 2784015 | 62284.3 |
| hypothetical protein | PQ455_13395 | Not Available | + | 2784320 - 2784592 | 9975.95 |
| hypothetical protein | PQ455_13400 | Not Available | - | 2784601 - 2785173 | 20890.8 |
| tyrosine-type recombinase/integrase | PQ455_13405 | P55459 | - | 2785178 - 2787613 | 89358.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.