Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | PQ455_13310 | P45199 | - | 2769884 - 2770606 | 27193.8 |
| catalase | PQ455_13315 | Q9X576 | + | 2771004 - 2773184 | 79047.4 |
| ankyrin repeat domain-containing protein | PQ455_13320 | Q95RG8 | + | 2773177 - 2773740 | 19197.6 |
| duf159 family protein | PQ455_13325 | Not Available | + | 2773935 - 2774423 | 17804.3 |
| hypothetical protein | PQ455_13330 | Not Available | + | 2774521 - 2774862 | 12846.0 |
| hypothetical protein | PQ455_13335 | Not Available | - | 2774878 - 2775078 | 6731.87 |
| crp/fnr family transcriptional regulator | PQ455_13340 | P51007 | + | 2775178 - 2775906 | 27376.1 |
| hypothetical protein | PQ455_13345 | Not Available | + | 2776017 - 2776460 | 15447.9 |
| exodeoxyribonuclease iii | PQ455_13350 | P0A1B0 | - | 2776461 - 2777303 | 31675.7 |
| dna ligase d | PQ455_13355 | Q9I1X7 | - | 2777311 - 2779122 | 65814.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.