Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | PQ455_13110 | P9WQM2 | - | 2726504 - 2727838 | 44720.2 |
| dipeptidase | PQ455_13115 | P31430 | + | 2727900 - 2729168 | 44905.9 |
| efflux rnd transporter periplasmic adaptor subunit | PQ455_13120 | P52477 | + | 2729297 - 2730490 | 41259.8 |
| efflux rnd transporter permease subunit | PQ455_13125 | P31224 | + | 2730498 - 2733692 | 113875.0 |
| efflux transporter outer membrane subunit | PQ455_13130 | Q9KJC1 | + | 2733689 - 2735224 | 53702.3 |
| Trna-val | Not Available | Not Available | + | 2735294 - 2735368 | Not Available |
| hypothetical protein | PQ455_13140 | Not Available | - | 2735548 - 2736315 | 28428.2 |
| is3 family transposase | PQ455_13145 | P24577 | + | 2736388 - 2737508 | 42713.3 |
| duf2155 domain-containing protein | PQ455_13150 | P0AEK1 | + | 2737543 - 2738297 | 26579.5 |
| hypothetical protein | PQ455_13155 | Not Available | + | 2738387 - 2738566 | 6437.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.