Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | PQ455_13060 | A5V884 | - | 2717331 - 2717831 | 17224.1 |
| yebc/pmpr family dna-binding transcriptional regulator | PQ455_13065 | A5V885 | - | 2717828 - 2718571 | 26570.1 |
| hypothetical protein | PQ455_13070 | Not Available | + | 2718651 - 2718815 | 5288.84 |
| duf2312 domain-containing protein | PQ455_13075 | Q3STZ0 | - | 2718928 - 2719167 | 9062.93 |
| duf1244 domain-containing protein | PQ455_13080 | Not Available | - | 2719378 - 2719683 | 11294.2 |
| pyruvate kinase | PQ455_13085 | O05118 | + | 2719857 - 2721248 | 49634.3 |
| duf3035 domain-containing protein | PQ455_13090 | Not Available | - | 2721379 - 2721786 | 13530.2 |
| signal peptidase ii | PQ455_13095 | A5VCW2 | - | 2721779 - 2722282 | 18211.5 |
| isoleucine--trna ligase | PQ455_13100 | Q5NQQ7 | - | 2722279 - 2725251 | 108709.0 |
| bifunctional riboflavin kinase/fad synthetase | PQ455_13105 | P22990 | - | 2725406 - 2726338 | 33345.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.