Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ncs1 family nucleobase:cation symporter-1 | PQ455_13010 | Q9LZD0 | - | 2708559 - 2710001 | 50965.0 |
| hypothetical protein | PQ455_13015 | Not Available | - | 2710045 - 2710635 | 20549.3 |
| biopolymer transporter exbd | PQ455_13020 | B0RLE8 | - | 2711648 - 2712076 | 15721.4 |
| biopolymer transporter exbd | PQ455_13025 | B0RLE7 | - | 2712099 - 2712581 | 16978.8 |
| mota/tolq/exbb proton channel family protein | PQ455_13030 | B0RLE6 | - | 2712685 - 2713440 | 26353.0 |
| tonb family protein | PQ455_13035 | P95374 | - | 2713525 - 2714187 | 22993.6 |
| hypothetical protein | PQ455_13040 | Not Available | + | 2714424 - 2715290 | 30220.9 |
| sdr family oxidoreductase | PQ455_13045 | P16543 | - | 2715426 - 2716193 | 26674.8 |
| dihydroneopterin aldolase | PQ455_13050 | Not Available | - | 2716190 - 2716642 | 16308.7 |
| n-acetyltransferase | PQ455_13055 | Not Available | + | 2716749 - 2717264 | 18486.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.