Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis protein | PQ455_12910 | P77377 | - | 2690395 - 2691906 | 53594.1 |
| glycosyltransferase family 2 protein | PQ455_12915 | Q9ZDI9 | + | 2692292 - 2693527 | 45647.7 |
| fad-dependent oxidoreductase | PQ455_12920 | O22229 | + | 2693622 - 2695271 | 56942.2 |
| dmt family transporter | PQ455_12925 | Q9KKU0 | + | 2695533 - 2696444 | 32226.2 |
| mfs transporter | PQ455_12930 | P32482 | + | 2696441 - 2697610 | 39033.0 |
| helix-turn-helix transcriptional regulator | PQ455_12935 | Not Available | + | 2697742 - 2698281 | 19807.9 |
| hypothetical protein | PQ455_12940 | Not Available | + | 2698351 - 2698716 | 12798.4 |
| hypothetical protein | PQ455_12945 | Not Available | + | 2698783 - 2699268 | 17703.0 |
| jab domain-containing protein | PQ455_12950 | C3MBW4 | + | 2699286 - 2699852 | 20253.5 |
| hypothetical protein | PQ455_12955 | Not Available | + | 2699849 - 2700223 | 13756.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.