Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | PQ455_12810 | Not Available | + | 2663969 - 2664583 | 22487.4 |
| hypothetical protein | PQ455_12815 | Not Available | - | 2664553 - 2665365 | 28333.4 |
| lipoyl(octanoyl) transferase lipb | PQ455_12820 | A5V649 | + | 2665437 - 2666105 | 24393.3 |
| hypothetical protein | PQ455_12825 | Not Available | + | 2666189 - 2666410 | 7664.18 |
| hypothetical protein | PQ455_12830 | Not Available | + | 2666628 - 2667275 | 23723.5 |
| atp-dependent dna helicase | PQ455_12835 | P54394 | + | 2667429 - 2670137 | 97410.7 |
| histidine phosphatase family protein | PQ455_12840 | P9WGF8 | + | 2670134 - 2670667 | 19205.9 |
| type ii toxin-antitoxin system death-on-curing family toxin | PQ455_12845 | A0QRY0 | - | 2671307 - 2671708 | 14721.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | PQ455_12850 | Not Available | - | 2671705 - 2671935 | 8336.24 |
| sulfotransferase | PQ455_12855 | Not Available | - | 2671932 - 2672675 | 27519.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.