Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf418 domain-containing protein | PQ455_12760 | P25747 | + | 2654465 - 2655748 | 46944.1 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | PQ455_12765 | A5V2F8 | + | 2655874 - 2656653 | 29585.6 |
| phosphoribosyl-amp cyclohydrolase | PQ455_12770 | A5V3S9 | - | 2656784 - 2657146 | 13224.7 |
| amidophosphoribosyltransferase | PQ455_12775 | P77935 | + | 2657243 - 2658706 | 53026.4 |
| sdr family nad(p)-dependent oxidoreductase | PQ455_12780 | P31808 | + | 2658703 - 2659413 | 24237.2 |
| hypothetical protein | PQ455_12785 | Not Available | - | 2659543 - 2659716 | 5844.77 |
| cytochrome c1 | PQ455_12790 | P23135 | - | 2660097 - 2660939 | 30640.8 |
| cytochrome b/b6 | PQ455_12795 | Q4UJM4 | - | 2660961 - 2662244 | 47966.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | PQ455_12800 | Q1RIA5 | - | 2662256 - 2662849 | 20878.1 |
| oxygen-dependent coproporphyrinogen oxidase | PQ455_12805 | Q89SC2 | + | 2663121 - 2663972 | 31205.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.