Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dipeptidase | PQ455_12710 | M1VV65 | - | 2639276 - 2640517 | 43878.8 |
| tonb-dependent receptor | PQ455_12715 | P76115 | - | 2640523 - 2642841 | 85025.8 |
| hypothetical protein | PQ455_12720 | Not Available | - | 2643024 - 2643800 | 27415.4 |
| protein-disulfide reductase dsbd family protein | PQ455_12725 | Q9I104 | - | 2643926 - 2645968 | 69651.5 |
| alkaline phosphatase family protein | PQ455_12730 | Q5NNZ8 | + | 2646047 - 2647675 | 57263.6 |
| dna topoisomerase iv subunit a | PQ455_12735 | Q59749 | + | 2647744 - 2649999 | 83249.4 |
| eal domain-containing protein | PQ455_12740 | Q9I310 | + | 2650031 - 2651755 | 62358.4 |
| cca trna nucleotidyltransferase | PQ455_12745 | Q8K1J6 | - | 2651891 - 2653099 | 42304.9 |
| coa pyrophosphatase | PQ455_12750 | A7MKE8 | - | 2653199 - 2653792 | 21453.9 |
| duf1285 domain-containing protein | PQ455_12755 | Not Available | - | 2653789 - 2654355 | 20384.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.