Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ctp synthase | PQ455_12660 | A5V8U1 | - | 2630452 - 2632086 | 59127.5 |
| preprotein translocase subunit secg | PQ455_12665 | Q1RGT7 | - | 2632229 - 2632582 | 11654.2 |
| f0f1 atp synthase subunit delta | PQ455_12670 | A5V3X2 | + | 2632892 - 2633446 | 19576.8 |
| f0f1 atp synthase subunit alpha | PQ455_12675 | A5V3X3 | + | 2633449 - 2634978 | 54598.5 |
| lyse family translocator | PQ455_12680 | A8AHJ0 | + | 2634992 - 2635615 | 21181.7 |
| f0f1 atp synthase subunit gamma | PQ455_12685 | A5V3X4 | + | 2635622 - 2636506 | 31926.8 |
| f0f1 atp synthase subunit beta | PQ455_12690 | A5V3X5 | + | 2636618 - 2638081 | 51623.4 |
| glutathione s-transferase | PQ455_12695 | Not Available | + | 2638078 - 2638263 | 6449.63 |
| atp synthase f1 subunit epsilon | PQ455_12700 | Q2G5N4 | + | 2638263 - 2638526 | 9220.07 |
| hypothetical protein | PQ455_12705 | Not Available | + | 2638523 - 2639155 | 21890.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.