Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-associated lipoprotein pal | PQ455_12610 | Q8U9L5 | - | 2622618 - 2623139 | 18295.6 |
| tol-pal system beta propeller repeat protein tolb | PQ455_12615 | A5V876 | - | 2623172 - 2624470 | 45873.1 |
| hypothetical protein | PQ455_12620 | Not Available | - | 2624551 - 2625432 | 30846.0 |
| protein tolr | PQ455_12625 | Q9RMT1 | - | 2625425 - 2625916 | 16625.4 |
| protein tolq | PQ455_12630 | P50598 | - | 2625981 - 2626679 | 24735.0 |
| ybgc/fadm family acyl-coa thioesterase | PQ455_12635 | P44679 | - | 2626670 - 2627131 | 17111.5 |
| holliday junction branch migration dna helicase ruvb | PQ455_12640 | A5V881 | - | 2627316 - 2628335 | 36578.4 |
| hypothetical protein | PQ455_12645 | Not Available | - | 2628345 - 2628692 | 11861.3 |
| 2-hydroxyacid dehydrogenase | PQ455_12650 | Q9CA90 | + | 2628822 - 2629724 | 31080.6 |
| holliday junction branch migration protein ruva | PQ455_12655 | A5V883 | - | 2629753 - 2630358 | 20139.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.