Sphingomonas naphthae DKC-5-1

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingomonadaceae

Genus

Sphingomonas

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingomonadaceae
GenusSphingomonas
SpeciesSphingomonas naphthae
StrainDKC-5-1

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingomonas naphthae DKC-5-1

Accession NumberCP117411.1

Gene Summary

Adenine Count

633777 bp

Thymine Count

632940 bp

Guanine Count

1323979 bp

Cytosine Count

1329131 bp

Genome Length

3919827 bp

Protein-coding Genes

3655 genes

Non-Coding Genes

124 genes

# of Chromosomes/Plasmids

5

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phenylacetate-coa oxygenase/reductase subunit paakPQ455_12510P76081-2603839 - 260492138788.4
phenylacetate-coa oxygenase subunit paajPQ455_12515P76080-2604932 - 260542617527.0
phenylacetate-coa oxygenase subunit paacPQ455_12520P76079-2605432 - 260619627756.9
1,2-phenylacetyl-coa epoxidase subunit bPQ455_12525P76078-2606196 - 260648310407.4
1,2-phenylacetyl-coa epoxidase subunit aPQ455_12530P76077-2606505 - 260750037253.2
3-oxoadipyl-coa thiolasePQ455_12535Q51956-2607568 - 260877041120.6
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomerase paagPQ455_12540P77467+2608898 - 260968627782.3
phenylacetic acid degradation bifunctional protein paazPQ455_12545P77455+2609706 - 261172171600.8
ethd family reductasePQ455_12550P43491+2611732 - 261203710959.3
tetr/acrr family transcriptional regulatorPQ455_12555P9WMB8+2612124 - 261272922303.7

Displaying genes 2501 – 2510 of 3756 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites