Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | PQ455_12460 | P05332 | + | 2594620 - 2595147 | 19175.9 |
| duf1345 domain-containing protein | PQ455_12465 | Not Available | + | 2595378 - 2596028 | 22827.0 |
| peptidase m61 | PQ455_12470 | Not Available | + | 2596091 - 2598004 | 70054.1 |
| gdsl-type esterase/lipase family protein | PQ455_12475 | Not Available | + | 2598178 - 2599173 | 34166.2 |
| hypothetical protein | PQ455_12480 | Not Available | - | 2599415 - 2599678 | 9247.42 |
| toxin-antitoxin system hicb family antitoxin | PQ455_12485 | Not Available | - | 2599668 - 2599883 | 7820.43 |
| spfh domain-containing protein | PQ455_12490 | Not Available | - | 2599896 - 2600792 | 32022.0 |
| maleylacetoacetate isomerase | PQ455_12495 | O86043 | - | 2600891 - 2601529 | 22780.3 |
| enoyl-coa hydratase-related protein | PQ455_12500 | P76082 | - | 2601618 - 2602382 | 26315.1 |
| 3-hydroxyacyl-coa dehydrogenase | PQ455_12505 | P76083 | - | 2602400 - 2603842 | 49449.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.