Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2og-fe(ii) oxygenase family protein | PQ455_12410 | Not Available | + | 2584823 - 2585560 | 27316.5 |
| tetratricopeptide repeat protein | PQ455_12415 | Not Available | + | 2585573 - 2587345 | 61919.9 |
| tonb-dependent receptor | PQ455_12420 | Q93SE0 | - | 2587556 - 2590522 | 104761.0 |
| hypothetical protein | PQ455_12425 | Not Available | + | 2590752 - 2591309 | 19709.8 |
| trna (guanosine(46)-n7)-methyltransferase trmb | PQ455_12430 | Q5NR81 | + | 2591354 - 2592034 | 25837.2 |
| duf2155 domain-containing protein | PQ455_12435 | Q6ERW9 | + | 2592600 - 2592782 | 6896.01 |
| Trna-ser | Not Available | Not Available | + | 2592935 - 2593024 | Not Available |
| heat shock protein hspq | PQ455_12445 | Q6D6C5 | + | 2593170 - 2593559 | 14358.8 |
| 50s ribosomal protein l21 | PQ455_12450 | A5VD70 | + | 2593822 - 2594151 | 11770.2 |
| 50s ribosomal protein l27 | PQ455_12455 | A5VD71 | + | 2594166 - 2594435 | 9488.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.