Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconolactonase | PQ455_12360 | Q989A3 | + | 2570196 - 2570906 | 25268.5 |
| phosphogluconate dehydratase | PQ455_12365 | P21909 | + | 2570903 - 2572729 | 64664.9 |
| glucokinase | PQ455_12370 | P21908 | + | 2572726 - 2573691 | 33353.1 |
| response regulator | PQ455_12375 | P9WGL4 | - | 2573770 - 2574804 | 36910.0 |
| response regulator | PQ455_12380 | Q55169 | - | 2574804 - 2575250 | 16409.6 |
| atp-binding protein | PQ455_12385 | E5KK10 | - | 2575255 - 2576676 | 52198.0 |
| tonb-dependent receptor | PQ455_12390 | E1W8M5 | - | 2576888 - 2579596 | 95046.3 |
| tonb-dependent receptor | PQ455_12395 | P17315 | - | 2579735 - 2582863 | 111008.0 |
| 2og-fe(ii) oxygenase | PQ455_12400 | Q9ZW86 | - | 2583095 - 2584045 | 32759.4 |
| 2og-fe(ii) oxygenase family protein | PQ455_12405 | Q6DE73 | - | 2584042 - 2584770 | 26148.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.