Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| marr family winged helix-turn-helix transcriptional regulator | PQ455_12310 | O33817 | + | 2552359 - 2552847 | 18377.8 |
| tonb-dependent receptor | PQ455_12315 | A1AIE8 | + | 2553071 - 2555782 | 95423.1 |
| alpha/beta hydrolase domain-containing protein | PQ455_12320 | Not Available | + | 2555785 - 2557326 | 54798.5 |
| coce/nond family hydrolase | PQ455_12325 | P9WIQ8 | + | 2557350 - 2559113 | 63565.3 |
| tannase/feruloyl esterase family alpha/beta hydrolase | PQ455_12330 | Q8P8Y5 | + | 2559110 - 2560624 | 53691.9 |
| pepsy domain-containing protein | PQ455_12335 | Not Available | - | 2560597 - 2561991 | 50647.1 |
| tonb-dependent receptor | PQ455_12340 | P76115 | - | 2561991 - 2564303 | 82017.2 |
| hypothetical protein | PQ455_12345 | Not Available | - | 2564491 - 2564892 | 13756.7 |
| trifunctional transcriptional regulator/proline dehydrogenase/l-glutamate gamma-semialdehyde dehydrogenase | PQ455_12350 | P95629 | + | 2564978 - 2568571 | 126265.0 |
| glucose-6-phosphate dehydrogenase | PQ455_12355 | P21907 | + | 2568722 - 2570203 | 54565.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.