Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i mannose-6-phosphate isomerase | PQ455_12210 | Q59935 | + | 2533083 - 2533934 | 30144.5 |
| nudix domain-containing protein | PQ455_12215 | Q92350 | - | 2533947 - 2534576 | 22587.9 |
| hypothetical protein | PQ455_12220 | Not Available | + | 2534684 - 2534938 | 8619.1 |
| lyttr family dna-binding domain-containing protein | PQ455_12225 | P26275 | - | 2534962 - 2535711 | 27393.2 |
| histidine kinase | PQ455_12230 | O31516 | - | 2535840 - 2537021 | 42851.1 |
| hypothetical protein | PQ455_12235 | Not Available | + | 2537177 - 2537449 | 9537.57 |
| hypothetical protein | PQ455_12240 | Not Available | + | 2537682 - 2538230 | 20202.1 |
| cox15/ctaa family protein | PQ455_12245 | A5VF68 | + | 2538400 - 2539425 | 37099.9 |
| hypothetical protein | PQ455_12250 | Not Available | + | 2539427 - 2540266 | 29546.8 |
| 50s ribosomal protein l13 | PQ455_12255 | Q11J65 | + | 2540423 - 2540902 | 17453.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.