Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-ii family nitrogen regulator | PQ455_12160 | P21193 | + | 2522005 - 2522343 | 12293.9 |
| type i glutamate--ammonia ligase | PQ455_12165 | Q59747 | + | 2522493 - 2523905 | 52137.1 |
| pard-like family protein | PQ455_12170 | Not Available | + | 2524132 - 2524344 | 7678.31 |
| type i methionyl aminopeptidase | PQ455_12175 | P0AE20 | + | 2524346 - 2525128 | 28579.3 |
| efflux rnd transporter permease subunit | PQ455_12180 | P25197 | + | 2525389 - 2528574 | 113167.0 |
| efflux rnd transporter periplasmic adaptor subunit | PQ455_12185 | B4EY99 | + | 2528567 - 2529766 | 41657.6 |
| efflux transporter outer membrane subunit | PQ455_12190 | Q9KJC1 | + | 2529753 - 2531186 | 50078.1 |
| hypothetical protein | PQ455_12195 | Not Available | + | 2531198 - 2531473 | 9829.73 |
| outer membrane beta-barrel protein | PQ455_12200 | P0A3U4 | - | 2531542 - 2532156 | 21736.4 |
| extensin family protein | PQ455_12205 | Not Available | - | 2532273 - 2533010 | 26016.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.