Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | PQ455_12110 | Q9X3X2 | + | 2512502 - 2513245 | 27807.4 |
| 2-polyprenylphenol 6-hydroxylase | PQ455_12115 | B1XWR5 | + | 2513400 - 2514944 | 56118.7 |
| tlya family rna methyltransferase | PQ455_12120 | P19672 | - | 2514994 - 2515731 | 25687.0 |
| tigr02594 family protein | PQ455_12125 | Not Available | - | 2515749 - 2516273 | 18912.9 |
| 1-deoxy-d-xylulose-5-phosphate synthase | PQ455_12130 | A5V6A9 | - | 2516460 - 2518382 | 67977.5 |
| merc domain-containing protein | PQ455_12135 | Not Available | - | 2518448 - 2518846 | 13393.8 |
| hypothetical protein | PQ455_12140 | Not Available | + | 2519012 - 2519440 | 14894.6 |
| hypothetical protein | PQ455_12145 | Not Available | + | 2519527 - 2519967 | 15412.5 |
| molybdopterin-binding protein | PQ455_12150 | Q9YAF9 | - | 2520042 - 2520797 | 26327.7 |
| type i methionyl aminopeptidase | PQ455_12155 | Q9ZCD3 | + | 2520863 - 2521690 | 29685.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.