Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | + | 2503946 - 2504022 | Not Available |
| rrf2 family transcriptional regulator | PQ455_12065 | O68025 | + | 2504161 - 2504589 | 15952.3 |
| sulfate abc transporter permease subunit cyst | PQ455_12070 | Q01895 | + | 2504991 - 2505794 | 28527.6 |
| sulfate abc transporter permease subunit cysw | PQ455_12075 | P74547 | + | 2505791 - 2506642 | 30607.0 |
| sulfate/molybdate abc transporter atp-binding protein | PQ455_12080 | Q8UH62 | + | 2506642 - 2507685 | 37451.2 |
| hypothetical protein | PQ455_12085 | Not Available | + | 2507735 - 2508022 | 10287.5 |
| fumarate hydratase | PQ455_12090 | P14407 | + | 2508237 - 2509757 | 54998.8 |
| outer membrane beta-barrel protein | PQ455_12095 | Not Available | - | 2509802 - 2510398 | 20348.3 |
| hypothetical protein | PQ455_12100 | Not Available | + | 2510561 - 2511631 | 40266.4 |
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | PQ455_12105 | A5VG06 | - | 2511644 - 2512456 | 30038.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.