Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1636 domain-containing protein | PQ455_12010 | Not Available | - | 2493167 - 2493574 | 14604.4 |
| hypothetical protein | PQ455_12015 | Not Available | - | 2493694 - 2494230 | 18034.7 |
| tonb-dependent receptor | PQ455_12020 | Q57H87 | - | 2494245 - 2496221 | 69970.8 |
| phoh family protein | PQ455_12025 | P0A9K5 | - | 2496802 - 2497797 | 36322.1 |
| hypothetical protein | PQ455_12030 | Not Available | + | 2497914 - 2498420 | 18457.8 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | PQ455_12035 | A5V8Y0 | - | 2498549 - 2499865 | 47201.6 |
| response regulator | PQ455_12040 | Q0PEV3 | - | 2499930 - 2500373 | 15354.7 |
| dicarboxylate/amino acid:cation symporter | PQ455_12045 | P24944 | + | 2500541 - 2501863 | 46771.6 |
| transporter | PQ455_12050 | Not Available | + | 2501924 - 2502733 | 28402.8 |
| glu/leu/phe/val dehydrogenase dimerization domain-containing protein | PQ455_12055 | P13154 | - | 2502780 - 2503829 | 35377.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.