Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase family protein | PQ455_11960 | Not Available | + | 2480277 - 2481311 | 38452.2 |
| dmt family transporter | PQ455_11965 | A0A0H2ZHZ4 | - | 2481315 - 2482205 | 30923.6 |
| ribonuclease e/g | PQ455_11970 | P44443 | - | 2482434 - 2485163 | 99631.7 |
| phenylalanine 4-monooxygenase | PQ455_11975 | Q9A7V7 | - | 2485694 - 2486536 | 31813.5 |
| chase3 domain-containing protein | PQ455_11980 | P0DOA0 | - | 2486701 - 2488569 | 67294.4 |
| pyridoxal phosphate-dependent class ii aminotransferase | PQ455_11985 | P21633 | + | 2488811 - 2489773 | 33717.4 |
| adenosylcobinamide-phosphate synthase cbib | PQ455_11990 | P0CY56 | + | 2489733 - 2490791 | 37406.9 |
| adenosylcobinamide-gdp ribazoletransferase | PQ455_11995 | Q2GBJ9 | - | 2490887 - 2491591 | 24150.2 |
| histidine phosphatase family protein | PQ455_12000 | B5F543 | - | 2491588 - 2492157 | 20042.0 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | PQ455_12005 | Q2GBJ7 | - | 2492154 - 2493170 | 33696.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.