Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4136 domain-containing protein | PQ455_11860 | P30794 | + | 2464750 - 2465343 | 20265.4 |
| m14-type cytosolic carboxypeptidase | PQ455_11865 | P30795 | + | 2465340 - 2466467 | 41594.7 |
| antitoxin maze family protein | PQ455_11870 | A0R0N3 | + | 2466527 - 2466745 | 8348.04 |
| type ii toxin-antitoxin system pemk/mazf family toxin | PQ455_11875 | A0R0N4 | + | 2466742 - 2467062 | 11528.2 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | PQ455_11880 | O08437 | - | 2467143 - 2467697 | 18868.2 |
| 30s ribosomal protein s21 | PQ455_11885 | Q5NLS3 | - | 2467744 - 2467950 | 8257.12 |
| (2fe-2s)-binding protein | PQ455_11890 | Q51697 | + | 2468164 - 2468712 | 19218.0 |
| rcnb family protein | PQ455_11895 | Not Available | + | 2468861 - 2469637 | 31098.5 |
| rcnb family protein | PQ455_11900 | Not Available | + | 2469851 - 2470327 | 18945.3 |
| hypothetical protein | PQ455_11905 | Not Available | - | 2470428 - 2471111 | 23935.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.