Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative dna modification/repair radical sam protein | PQ455_11810 | Not Available | + | 2453893 - 2455140 | 46447.2 |
| abc transporter atp-binding protein | PQ455_11815 | P36879 | + | 2455179 - 2456111 | 33716.1 |
| abc transporter permease | PQ455_11820 | P0AFN8 | + | 2456108 - 2456875 | 28382.6 |
| tonb-dependent receptor | PQ455_11825 | Q9JZN9 | - | 2456991 - 2459129 | 75536.5 |
| hypothetical protein | PQ455_11830 | Not Available | + | 2459205 - 2459945 | 27220.6 |
| hypothetical protein | PQ455_11835 | Not Available | + | 2460010 - 2460501 | 17789.1 |
| hypothetical protein | PQ455_11840 | Not Available | - | 2460548 - 2460874 | 10772.3 |
| excinuclease abc subunit uvra | PQ455_11845 | O31151 | + | 2461064 - 2464015 | 106249.0 |
| gnat family n-acetyltransferase | PQ455_11850 | Q5ZJI6 | - | 2464037 - 2464321 | 9945.92 |
| type b 50s ribosomal protein l36 | PQ455_11855 | A5VAZ8 | - | 2464465 - 2464590 | 5038.27 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.