Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s12 methylthiotransferase rimo | PQ455_11610 | A5V3Z4 | + | 2421231 - 2422565 | 48350.9 |
| polyhydroxyalkanoate depolymerase | PQ455_11615 | Not Available | - | 2422760 - 2423974 | 44925.1 |
| glutathione s-transferase | PQ455_11620 | Q18938 | + | 2424098 - 2424748 | 24197.0 |
| crp/fnr family transcriptional regulator | PQ455_11625 | P51007 | + | 2424895 - 2425593 | 26290.0 |
| deda family protein | PQ455_11630 | P30149 | - | 2425688 - 2426365 | 24122.3 |
| biotin--[acetyl-coa-carboxylase] ligase | PQ455_11635 | P29906 | - | 2426602 - 2427312 | 24371.3 |
| nadh-quinone oxidoreductase subunit nuon | PQ455_11640 | A5VAN3 | - | 2427401 - 2428837 | 49518.7 |
| nadh-quinone oxidoreductase subunit m | PQ455_11645 | P50974 | - | 2428834 - 2430369 | 55893.1 |
| nadh-quinone oxidoreductase subunit l | PQ455_11650 | P50939 | - | 2430375 - 2432513 | 76385.0 |
| nadh-quinone oxidoreductase subunit nuok | PQ455_11655 | Q1GTK9 | - | 2432521 - 2432826 | 10913.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.