Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | PQ455_11510 | Q05197 | + | 2403951 - 2404598 | 23802.8 |
| hypothetical protein | PQ455_11515 | Not Available | + | 2404601 - 2405236 | 24083.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | PQ455_11520 | A1ASE9 | - | 2405333 - 2407000 | 60371.7 |
| archaetidylserine decarboxylase | PQ455_11525 | Q1D614 | + | 2407036 - 2407926 | 32215.1 |
| hypothetical protein | PQ455_11530 | Not Available | + | 2407978 - 2408958 | 34629.1 |
| uracil-dna glycosylase | PQ455_11535 | Q5SJ65 | - | 2408981 - 2409661 | 24018.9 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | PQ455_11540 | P71512 | + | 2409685 - 2410182 | 18056.4 |
| lysophospholipid acyltransferase family protein | PQ455_11545 | Q9HW50 | - | 2410179 - 2410913 | 25624.3 |
| fur family transcriptional regulator | PQ455_11550 | O07315 | - | 2410918 - 2411340 | 15974.0 |
| gnat family n-acetyltransferase | PQ455_11555 | Q8ZJW4 | - | 2411401 - 2411871 | 16729.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.