Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | PQ455_11460 | O07017 | + | 2396572 - 2397330 | 25907.3 |
| histidine kinase | PQ455_11465 | O34757 | + | 2397327 - 2398421 | 38274.9 |
| response regulator transcription factor | PQ455_11470 | O07019 | + | 2398418 - 2399029 | 21073.4 |
| duf2155 domain-containing protein | PQ455_11475 | Not Available | + | 2399257 - 2399499 | 8412.35 |
| 8-oxo-dgtp diphosphatase mutt | PQ455_11480 | P08337 | - | 2399507 - 2399908 | 14307.8 |
| flp family type ivb pilin | PQ455_11485 | Not Available | + | 2399979 - 2400152 | 5867.09 |
| flp family type ivb pilin | PQ455_11490 | Not Available | + | 2400268 - 2400426 | 5329.75 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | PQ455_11495 | A5V3X0 | - | 2400655 - 2401596 | 33577.5 |
| glycosyltransferase family 1 protein | PQ455_11500 | A0QRG8 | - | 2401771 - 2402820 | 37042.7 |
| udp-2,3-diacylglucosamine diphosphatase | PQ455_11505 | Q493A2 | - | 2402817 - 2403665 | 32087.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.