Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo acid dehydrogenase subunit e2 | PQ455_11410 | Q1RHI5 | + | 2388057 - 2389283 | 43205.0 |
| tetr/acrr family transcriptional regulator | PQ455_11415 | Not Available | - | 2389503 - 2390102 | 21118.5 |
| oxidoreductase | PQ455_11420 | A6SSW9 | + | 2390168 - 2391010 | 29487.2 |
| aspartate/glutamate racemase family protein | PQ455_11425 | A0A0H3JGH6 | + | 2391021 - 2391716 | 25255.6 |
| alpha/beta hydrolase-fold protein | PQ455_11430 | P31471 | - | 2391724 - 2393295 | 56729.1 |
| duf308 domain-containing protein | PQ455_11435 | Not Available | - | 2393389 - 2393970 | 20459.1 |
| duf1109 domain-containing protein | PQ455_11440 | A0A0H3CC47 | - | 2394088 - 2394729 | 22157.0 |
| sigma-70 family rna polymerase sigma factor | PQ455_11445 | G8QM61 | - | 2394719 - 2395222 | 18561.2 |
| hypothetical protein | PQ455_11450 | Not Available | - | 2395362 - 2395514 | 5429.39 |
| abc transporter atp-binding protein | PQ455_11455 | O07016 | + | 2395664 - 2396575 | 31266.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.