Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas naphthae |
| Strain | DKC-5-1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas naphthae DKC-5-1
Accession NumberCP117411.1
Gene Summary
Adenine Count
633777 bp
Thymine Count
632940 bp
Guanine Count
1323979 bp
Cytosine Count
1329131 bp
Genome Length
3919827 bp
Protein-coding Genes
3655 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
5
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | PQ455_11360 | Not Available | - | 2372721 - 2373110 | 14308.9 |
| cbb3-type cytochrome c oxidase subunit i | PQ455_11365 | P24010 | - | 2373107 - 2375647 | 92253.4 |
| cytochrome c oxidase subunit ii | PQ455_11370 | Q04441 | - | 2375644 - 2376600 | 33730.1 |
| thiamine pyrophosphate-binding protein | PQ455_11375 | P07003 | + | 2376915 - 2378612 | 59995.8 |
| arac family transcriptional regulator | PQ455_11380 | P9WMJ2 | + | 2378958 - 2379986 | 37383.2 |
| alpha/beta hydrolase | PQ455_11385 | Q01109 | - | 2379983 - 2380921 | 32506.0 |
| mfs transporter | PQ455_11390 | P76230 | - | 2380921 - 2382261 | 45953.4 |
| alpha/beta fold hydrolase | PQ455_11395 | Q9Y875 | - | 2382255 - 2383235 | 34424.0 |
| tonb-dependent receptor | PQ455_11400 | P46359 | - | 2383225 - 2385594 | 84934.5 |
| transketolase c-terminal domain-containing protein | PQ455_11405 | P37941 | + | 2385949 - 2388054 | 76610.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.